Structure prediction with Protenix, an open AlphaFold3 reproduction. Use this skill when: (1) Predicting complex structures with an AF3-class model, (2) Wanting an open alternative to AF3 alongside Boltz and Chai, (3) Validating designed binder-target complexes.
How to install protenix?
adaptyvbio/protein-design-skills/protenix
$npx -y skills add adaptyvbio/protein-design-skills --skill protenixInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/adaptyvbio/protein-design-skills" --skill "adaptyvbio/protein-design-skills/protenix"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/adaptyvbio/protein-design-skills" that are relevant to the current task. Run `npx skills add "https://github.com/adaptyvbio/protein-design-skills"` and select the relevant skills, then follow their instructions.
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