estimate-immune-score-analysis
byaipoch· 77 skills
Use this skill to compute ESTIMATE immune-related microenvironment scores from a bulk expression matrix, generate an ESTIMATE score heatmap, and optionally generate group-wise ESTIMATE score boxplots plus significance tables when a sample group file is supplied. Trigger keywords: ESTIMATE, immune score, stromal score, tumor microenvironment score. NOT for: immune cell deconvolution, single-cell analysis, differential expression, clinical diagnosis.
How to install estimate-immune-score-analysis?
aipoch/medical-research-skills/estimate-immune-score-analysis
$npx -y skills add aipoch/medical-research-skills --skill estimate-immune-score-analysisInstalls into the current project.
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Run `npx skills use "https://github.com/aipoch/medical-research-skills" --skill "aipoch/medical-research-skills/estimate-immune-score-analysis"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/aipoch/medical-research-skills" that are relevant to the current task. Run `npx skills add "https://github.com/aipoch/medical-research-skills"` and select the relevant skills, then follow their instructions.
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