Workflow guidance and model reference for single-cell foundation models (scGPT, Geneformer, UCE, scBERT, etc.). Covers model selection, validation-first workflow, and per-model I/O contracts.
How to install scfm?
aristoteleo/pantheonos/scfm
$npx -y skills add aristoteleo/pantheonos --skill scfmInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/aristoteleo/pantheonos" --skill "aristoteleo/pantheonos/scfm"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/aristoteleo/pantheonos" that are relevant to the current task. Run `npx skills add "https://github.com/aristoteleo/pantheonos"` and select the relevant skills, then follow their instructions.
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