byholobiomicslab· 58 skills
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Use when after differential peak analysis (tl.diff_test) has identified peaks that differ in accessibility across cell types or conditions.
$npx -y skills add holobiomicslab/asb-skill-collections --skill atac-seq-peak-annotationInstalls into the current project.
Run `npx skills use "https://github.com/holobiomicslab/asb-skill-collections" --skill "holobiomicslab/asb-skill-collections/atac-seq-peak-annotation"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/holobiomicslab/asb-skill-collections" that are relevant to the current task. Run `npx skills add "https://github.com/holobiomicslab/asb-skill-collections"` and select the relevant skills, then follow their instructions.