bedgraph-file-export
byholobiomicslab· 58 skills
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Use when after computing per-bin coverage depth using cooltools.coverage() on a loaded cooler object, when you need to (1) share the coverage track with non-Python tools, (2) visualize it in a genome browser, or (3) integrate it with downstream analyses that expect bedGraph or tabular input.
How to install bedgraph-file-export?
holobiomicslab/asb-skill-collections/bedgraph-file-export
$npx -y skills add holobiomicslab/asb-skill-collections --skill bedgraph-file-exportInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/holobiomicslab/asb-skill-collections" --skill "holobiomicslab/asb-skill-collections/bedgraph-file-export"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/holobiomicslab/asb-skill-collections" that are relevant to the current task. Run `npx skills add "https://github.com/holobiomicslab/asb-skill-collections"` and select the relevant skills, then follow their instructions.
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