bisulfite-sequencing-data-loading
byholobiomicslab· 58 skills
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Use when you have raw methylation call files from Bismark, MethylDackel, or similar bisulfite alignment tools (bedGraph, cytosine report, or tabix-indexed formats) and need to import them into R as methylRaw or methylRawListDB objects for downstream differential methylation analysis, quality.
How to install bisulfite-sequencing-data-loading?
holobiomicslab/asb-skill-collections/bisulfite-sequencing-data-loading
$npx -y skills add holobiomicslab/asb-skill-collections --skill bisulfite-sequencing-data-loadingInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/holobiomicslab/asb-skill-collections" --skill "holobiomicslab/asb-skill-collections/bisulfite-sequencing-data-loading"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/holobiomicslab/asb-skill-collections" that are relevant to the current task. Run `npx skills add "https://github.com/holobiomicslab/asb-skill-collections"` and select the relevant skills, then follow their instructions.
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