contact-frequency-smoothing-log-space
byholobiomicslab· 58 skills
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Use when you have a precomputed expected contact frequency table (TSV with columns: dist_bp, contact_frequency, n_valid) derived from cooler Hi-C matrices and need to generate a smoothed, log-binned P(s) curve for downstream analysis such as TAD detection, contact probability visualization, or.
How to install contact-frequency-smoothing-log-space?
holobiomicslab/asb-skill-collections/contact-frequency-smoothing-log-space
$npx -y skills add holobiomicslab/asb-skill-collections --skill contact-frequency-smoothing-log-spaceInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/holobiomicslab/asb-skill-collections" --skill "holobiomicslab/asb-skill-collections/contact-frequency-smoothing-log-space"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/holobiomicslab/asb-skill-collections" that are relevant to the current task. Run `npx skills add "https://github.com/holobiomicslab/asb-skill-collections"` and select the relevant skills, then follow their instructions.
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