This skill should be used when the user asks about "nf-core conventions", "strict syntax", "naming conventions", "output patterns", "coding style", "best practices", "parameter naming", "channel naming", "process labels", or how to structure nf-core code correctly. Covers strict syntax rules (Q2 2026 deadline), output glob patterns, and naming conventions.
How to install best-practices?
jonasscheid/claude-nfcore-plugin/best-practices
$npx -y skills add jonasscheid/claude-nfcore-plugin --skill best-practicesInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/jonasscheid/claude-nfcore-plugin" --skill "jonasscheid/claude-nfcore-plugin/best-practices"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/jonasscheid/claude-nfcore-plugin" that are relevant to the current task. Run `npx skills add "https://github.com/jonasscheid/claude-nfcore-plugin"` and select the relevant skills, then follow their instructions.
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