gget
byk-dense-ai· 237 skills
Fast CLI/Python queries to 20+ bioinformatics databases. Use for quick lookups: gene info, BLAST/BLAT, viral sequence downloads, AlphaFold structures, enrichment analysis, OpenTargets, COSMIC, CELLxGENE, and 8cube mouse specificity/expression data. Best for interactive exploration and simple queries. For batch processing or advanced BLAST use biopython; for multi-database Python workflows use bioservices.
How to install gget?
k-dense-ai/scientific-agent-skills/gget
$npx -y skills add k-dense-ai/scientific-agent-skills --skill ggetInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/k-dense-ai/scientific-agent-skills" --skill "k-dense-ai/scientific-agent-skills/gget"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/k-dense-ai/scientific-agent-skills" that are relevant to the current task. Run `npx skills add "https://github.com/k-dense-ai/scientific-agent-skills"` and select the relevant skills, then follow their instructions.
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