phylogenetics
byleonchaox· 59 skills
Build and analyze phylogenetic trees using MAFFT (multiple alignment), IQ-TREE 2 (maximum likelihood), and FastTree (fast NJ/ML). Visualize with ETE3 or FigTree. For evolutionary analysis, microbial genomics, viral phylodynamics, protein family analysis, and molecular clock studies.
How to install phylogenetics?
leonchaox/qinyan-academic-skills/phylogenetics
$npx -y skills add leonchaox/qinyan-academic-skills --skill phylogeneticsInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/leonchaox/qinyan-academic-skills" --skill "leonchaox/qinyan-academic-skills/phylogenetics"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/leonchaox/qinyan-academic-skills" that are relevant to the current task. Run `npx skills add "https://github.com/leonchaox/qinyan-academic-skills"` and select the relevant skills, then follow their instructions.
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