vault

Manage the research project's vault — the clean, visible, templated project folder (research/<project>/) where every file lives in a numbered lifecycle-stage place, plus the knowledge layer (canonical facts like sample size / IRB# / journal, one shared bibliography, decisions log, open questions, glossary, voice profile, entities — pseudonyms only, never PII). Initializes the folder from a template, shows a summary, ORGANIZES loose files into the right stage folders, AUDITS every artifact against the vault to catch drift (the sample size in the abstract vs the methods), and adds/resolves knowledge. Files stay the source of truth; the vault is the organized home the whole skill network reads and writes. Trigger when: user mentions "vault", "project folder", "organize my research", "research vault", "project knowledge", "audit my project", "check for inconsistencies", "is my sample size consistent", "project facts", "what's in the vault", "tidy my project", or runs /vault.