proteinmpnn-nim
bynvidia-bionemo· 32 skills
Run ProteinMPNN inverse folding via NVIDIA NIM to design protein sequences for a target backbone. Use for ProteinMPNN, inverse folding, sequence design, backbone redesign, fixed chains/residues, omit_AAs, sampling temperature, soluble model, hosted NVIDIA API, local Docker, PDB input, and multi-FASTA output.
How to install proteinmpnn-nim?
nvidia-bionemo/bionemo-agent-toolkit/proteinmpnn-nim
$npx -y skills add nvidia-bionemo/bionemo-agent-toolkit --skill proteinmpnn-nimInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/nvidia-bionemo/bionemo-agent-toolkit" --skill "nvidia-bionemo/bionemo-agent-toolkit/proteinmpnn-nim"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/nvidia-bionemo/bionemo-agent-toolkit" that are relevant to the current task. Run `npx skills add "https://github.com/nvidia-bionemo/bionemo-agent-toolkit"` and select the relevant skills, then follow their instructions.
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