Guide through omicverse's alignment module for SRA downloading, FASTQ quality control, STAR alignment, gene quantification, and single-cell kallisto/bustools pipelines covering both bulk and single-cell RNA-seq workflows.
How to install fastq-analysis?
omicverse/omicclaw/fastq-analysis
$npx -y skills add omicverse/omicclaw --skill fastq-analysisInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/omicverse/omicclaw" --skill "omicverse/omicclaw/fastq-analysis"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/omicverse/omicclaw" that are relevant to the current task. Run `npx skills add "https://github.com/omicverse/omicclaw"` and select the relevant skills, then follow their instructions.
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