Scaffold or audit an entire research project repository organized around its source library. Use when starting, structuring, organizing, or reviewing a research repo. Build sources/{og,md,unprocessed}, references.bib, a PDF-to-Markdown converter, a repo-local process-source skill, AGENTS.md, .gitignore, .venv, and the relevant analysis/manuscript/review folders; or audit an existing layout. Not for one-PDF intake or publication replication packages.
How to install research-repo?
scdenney/open-science-skills/research-repo
$npx -y skills add scdenney/open-science-skills --skill research-repoInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/scdenney/open-science-skills" --skill "scdenney/open-science-skills/research-repo"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/scdenney/open-science-skills" that are relevant to the current task. Run `npx skills add "https://github.com/scdenney/open-science-skills"` and select the relevant skills, then follow their instructions.
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