scvi-tools
bysynthetic-sciences· 59 skills
Deep generative models for single-cell omics. Use when you need probabilistic batch correction (scVI), transfer learning, differential expression with uncertainty, or multi-modal integration (TOTALVI, MultiVI). Best for advanced modeling, batch effects, multimodal data. For standard analysis pipelines use scanpy.
How to install scvi-tools?
synthetic-sciences/openscience/scvi-tools
$npx -y skills add synthetic-sciences/openscience --skill scvi-toolsInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/synthetic-sciences/openscience" --skill "synthetic-sciences/openscience/scvi-tools"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/synthetic-sciences/openscience" that are relevant to the current task. Run `npx skills add "https://github.com/synthetic-sciences/openscience"` and select the relevant skills, then follow their instructions.
Related
6 picksType
- azure-aiUse for Azure AI: Search, Speech, OpenAI, Document Intelligence. Helps with search, vector/hybrid search, speech-to-text, text-to-speech, transcription, OCR.Jul 2026
- ai-research-exploreRigor Explore compatible skill slug for meaningful and potentially novel deep learning research candidates.Jul 2026
- ai-research-reproductionRigor Reproduce compatible skill slug for README-first deep learning repository reproduction.Jul 2026
- explore-codeRigor Improve implementation leaf skill for auditable candidate implementation in deep learning research repositories.Jul 2026
- run-trainRigor Train skill for deep learning research repositories. Use when a documented or selected training command should be run conservatively for startup…Jul 2026
- explore-runRigor Improve / Rigor Explore run leaf skill for bounded exploratory evidence in deep learning research repositories.Jul 2026
