Use OrthoFinder for identifying orthologous gene groups across multiple genomes, inferring gene trees, and identifying orthogroups (clusters of orthologous genes).
How to install orthofinder?
albert-ying/autonomous-lab/orthofinder
$npx -y skills add albert-ying/autonomous-lab --skill orthofinderInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/albert-ying/autonomous-lab" --skill "albert-ying/autonomous-lab/orthofinder"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/albert-ying/autonomous-lab" that are relevant to the current task. Run `npx skills add "https://github.com/albert-ying/autonomous-lab"` and select the relevant skills, then follow their instructions.
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