$npx -y skills add LeonChaoX/qinyan-academic-skills --skill medical-imaging-reviewWrite comprehensive literature reviews for medical imaging AI research. Use when writing survey papers, systematic reviews, or literature analyses on topics like segmentation, detection, classification in CT, MRI, X-ray, ultrasound, or pathology imaging. Triggers on requests for
| 1 | # Medical Imaging AI Literature Review Skill |
| 2 | |
| 3 | Write comprehensive literature reviews following a systematic 7-phase workflow. |
| 4 | |
| 5 | ## Quick Start |
| 6 | |
| 7 | 1. **Initialize project** with three core files: |
| 8 | - `CLAUDE.md` - Writing guidelines and terminology |
| 9 | - `IMPLEMENTATION_PLAN.md` - Staged execution plan |
| 10 | - `manuscript_draft.md` - Main manuscript |
| 11 | |
| 12 | 2. **Follow the 7-phase workflow** (see [references/WORKFLOW.md](references/WORKFLOW.md)) |
| 13 | |
| 14 | 3. **Use domain-specific templates** (see [references/DOMAINS.md](references/DOMAINS.md)) |
| 15 | |
| 16 | --- |
| 17 | |
| 18 | ## Core Principles |
| 19 | |
| 20 | ### Writing Style |
| 21 | - **Hedging language**: "may", "suggests", "appears to", "has shown promising results" |
| 22 | - **Avoid absolutes**: Never say "X is the best method" |
| 23 | - **Citation support**: Every claim needs reference |
| 24 | - **Limitations**: Each method section needs a Limitations paragraph |
| 25 | |
| 26 | ### Required Elements |
| 27 | - **Key Points box** (3-5 bullets) after title |
| 28 | - **Comparison table** for each major section |
| 29 | - **Performance metrics**: Dice (0.XXX), HD95 (X.XX mm) |
| 30 | - **Figure placeholders** with detailed captions |
| 31 | - **References**: 80-120 typical, organized by topic |
| 32 | |
| 33 | ### Paragraph Structure |
| 34 | ``` |
| 35 | Topic sentence (main claim) |
| 36 | → Supporting evidence (citations + data) |
| 37 | → Analysis (critical evaluation) |
| 38 | → Transition to next paragraph |
| 39 | ``` |
| 40 | |
| 41 | --- |
| 42 | |
| 43 | ## Literature Sources |
| 44 | |
| 45 | Use multi-source strategy for comprehensive coverage: |
| 46 | |
| 47 | | Source | Best For | Tools | |
| 48 | |--------|----------|-------| |
| 49 | | ArXiv | Latest DL methods, preprints | `search_papers`, `read_paper` | |
| 50 | | PubMed | Clinical validation, peer-reviewed | `pubmed_search_articles` | |
| 51 | | Zotero | Existing library, organized refs | `zotero_search_items` | |
| 52 | |
| 53 | For MCP configuration details, see [references/MCP_SETUP.md](references/MCP_SETUP.md). |
| 54 | |
| 55 | --- |
| 56 | |
| 57 | ## Standard Review Structure |
| 58 | |
| 59 | ```markdown |
| 60 | # [Title]: State of the Art and Future Directions |
| 61 | |
| 62 | ## Key Points |
| 63 | - [3-5 bullets summarizing main findings] |
| 64 | |
| 65 | ## Abstract |
| 66 | |
| 67 | ## 1. Introduction |
| 68 | ### 1.1 Clinical Background |
| 69 | ### 1.2 Technical Challenges |
| 70 | ### 1.3 Scope and Contributions |
| 71 | |
| 72 | ## 2. Datasets and Evaluation Metrics |
| 73 | ### 2.1 Public Datasets (Table 1) |
| 74 | ### 2.2 Evaluation Metrics |
| 75 | |
| 76 | ## 3. Deep Learning Methods |
| 77 | ### 3.1 [Category 1] |
| 78 | ### 3.2 [Category 2] |
| 79 | (Table 2: Method Comparison) |
| 80 | |
| 81 | ## 4. Downstream Applications |
| 82 | |
| 83 | ## 5. Commercial Products & Clinical Translation (Table 3) |
| 84 | |
| 85 | ## 6. Discussion |
| 86 | ### 6.1 Current Limitations |
| 87 | ### 6.2 Future Directions |
| 88 | |
| 89 | ## 7. Conclusion |
| 90 | |
| 91 | ## References |
| 92 | ``` |
| 93 | |
| 94 | --- |
| 95 | |
| 96 | ## Method Description Template |
| 97 | |
| 98 | ```markdown |
| 99 | ### 3.X [Method Category] |
| 100 | |
| 101 | [1-2 paragraph introduction with motivation] |
| 102 | |
| 103 | **[Method Name]:** [Author] et al. [ref] proposed [method], which [innovation]: |
| 104 | - [Key component 1] |
| 105 | - [Key component 2] |
| 106 | Achieves Dice of X.XX on [dataset]. |
| 107 | |
| 108 | **Limitations:** Despite advantages, [category] methods face: |
| 109 | (1) [limit 1]; (2) [limit 2]. |
| 110 | ``` |
| 111 | |
| 112 | --- |
| 113 | |
| 114 | ## Citation Patterns |
| 115 | |
| 116 | ```markdown |
| 117 | # Data citation |
| 118 | "...achieved Dice of 0.89 [23]" |
| 119 | |
| 120 | # Method citation |
| 121 | "Gu et al. [45] proposed..." |
| 122 | |
| 123 | # Multi-citation |
| 124 | "Several studies demonstrated... [12, 15, 23]" |
| 125 | |
| 126 | # Comparative |
| 127 | "While [12] focused on..., [15] addressed..." |
| 128 | ``` |
| 129 | |
| 130 | --- |
| 131 | |
| 132 | ## Reference Files |
| 133 | |
| 134 | | File | Purpose | |
| 135 | |------|---------| |
| 136 | | [references/WORKFLOW.md](references/WORKFLOW.md) | Detailed 7-phase workflow | |
| 137 | | [references/TEMPLATES.md](references/TEMPLATES.md) | CLAUDE.md and IMPLEMENTATION_PLAN.md templates | |
| 138 | | [references/DOMAINS.md](references/DOMAINS.md) | Domain-specific method categories | |
| 139 | | [references/MCP_SETUP.md](references/MCP_SETUP.md) | MCP server configuration | |
| 140 | | [references/QUALITY_CHECKLIST.md](references/QUALITY_CHECKLIST.md) | Pre-submission quality checklist | |