tooluniverse-expression-data-retrieval
bymims-harvard· 57 skills
Retrieve gene expression and omics datasets from ArrayExpress and BioStudies with gene disambiguation and quality assessment. Use for finding RNA-seq/microarray datasets by organism/tissue/condition, comparing across studies (case-control, time-series, dose-response), and assessing dataset suitability before downloading. Always uses English search terms.
How to install tooluniverse-expression-data-retrieval?
mims-harvard/tooluniverse/tooluniverse-expression-data-retrieval
$npx -y skills add mims-harvard/tooluniverse --skill tooluniverse-expression-data-retrievalInstalls into the current project.
›Prefer a prompt? Paste this to your agent
Run `npx skills use "https://github.com/mims-harvard/tooluniverse" --skill "mims-harvard/tooluniverse/tooluniverse-expression-data-retrieval"` and follow the generated skill instructions now. Read its complete output, redirecting it to a temporary file first if necessary. Resolve relative paths from the supporting-files directory it provides.
Use the skills in "https://github.com/mims-harvard/tooluniverse" that are relevant to the current task. Run `npx skills add "https://github.com/mims-harvard/tooluniverse"` and select the relevant skills, then follow their instructions.
Related
6 picksType
- researchInvestigate a question against high-trust primary sources and capture the findings as a Markdown file in the repo.Jul 2026
- analyze-projectRigor Analyze / Rigor Audit read-only skill for deep learning research repositories.Jul 2026
- paper-context-resolverRigor Paper Context helper for README-first deep learning repo reproduction.Jul 2026
- repo-intake-and-planRigor Intake helper for README-first deep learning repo reproduction.Jul 2026
- firecrawl-searchWeb search with full page content extraction. Use this skill whenever the user asks to search the web, find articles, research a topic, look something up, find…Jul 2026
- customer-researchWhen the user wants to conduct, analyze, or synthesize customer research.Jul 2026
