neuromechanist/research-skills
34 skills
$npx skills add neuromechanist/research-skillsSkillInstalls
agent-fanoutUse this skill when the user asks to \"fan out agents\", \"spawn agents\", \"use an agent team\", \"parallel agents\", \"delegate to subagents\", \"act as team lead\", \"orchestrate implementation\", ai-full-figureThis skill should be used when the user asks to "generate an AI figure", "make a full AI-generated figure", "make a poster figure", "make a presentation figure", "generate a figure with AI", "create abids-conversionUse this skill for \"convert to BIDS\", \"BIDS format\", \"create BIDS dataset\", \"BIDS sidecar\", \"participants.tsv\", \"events.tsv\", \"EEG BIDS\", \"EMG BIDS\", \"MEG BIDS\", \"fMRI BIDS\", \"BIDci-scaffoldingThis skill should be used when the user says \"set up CI\", \"create GitHub Actions\", \"scaffold CI pipeline\", \"add CI/CD\", \"configure continuous integration\", \"create test workflow\", \"createcodebase-onboardingUse this skill when the user asks to \"explore this codebase\", \"understand this repo\", \"map the architecture\", \"review our stack\", \"get up to speed\", \"break ground\" on an unfamiliar projectdebuggingUse this skill when the user asks to \"debug\", \"find the root cause\", \"figure out why X fails\", \"investigate this bug\", \"this test is flaky\", \"the build broke\", \"production incident\", \"wdocker-packagingThis skill should be used when the user says \"create Dockerfile\", \"dockerize project\", \"Docker packaging\", \"container setup\", \"multi-stage build\", \"Docker Compose\", \"containerize applicatdocument-processingThis skill should be used when the user says \"process documents\", \"extract text from PDF\", \"OCR this document\", \"convert PDF to markdown\", \"extract emails from documents\", \"parse document\"engineering-loopUse this skill when the user asks to \"implement this change\", \"fix this issue\", \"add this feature\", \"make this change properly\", \"ship this\", or for any ordinary single-PR development task: epic-devExecute the project epic development workflow for Codex. Use when the user asks for "epic dev", "epic-dev", "/epic-dev", "run the epic workflow", "create an epic", "resume the epic", "--resume", "--neexperiment-designUse this skill for \"design experiment\", \"create PsychoPy experiment\", \"stimulus presentation\", \"experiment protocol\", \"timing validation\", \"trial structure\", \"block design\", \"event-relafigure-qaUse this skill to QA a scientific figure for journal compliance, alignment, palette correctness, and label legibility. Triggers on "QA this figure", "check this figure", "review my figure", "is this fgrant-figure-qaUse this skill to review grant proposal figures for compliance, resolution, accessibility, and quality. Triggers on "check grant figures", "review proposal figures", "figure QA for grant", "NIH figuregrant-reviewThis skill should be used when the user asks to "review a grant", "review my proposal", "score this grant", "evaluate my specific aims", "critique my research strategy", "review as an NIH reviewer", "grant-writingThis skill should be used when the user asks to "write a grant proposal", "draft specific aims", "write a research strategy", "create an NIH proposal", "create an NSF proposal", "write a significance humanizerUse this skill for \"humanize this text\", \"remove AI tells\", \"make this less AI-sounding\", \"strip AI patterns\", \"de-AI my writing\", \"reduce AI-isms\", \"final natural-writing pass\", \"checkimplementation-planningUse this skill when the user asks to \"plan this feature\", \"write an implementation plan\", \"design before coding\", \"think through the approach\", \"review this plan\", or before any multi-file cinit-projectUse this skill for \"initialize project\", \"set up project\", \"scaffold project\", \"create AGENTS.md\", \"create CLAUDE.md\", \"set up rules\", \"create context directory\", \"vibe rules\", \"projeinstall-user-instructionsInstall, update, or audit general user-level AI coding instructions across Claude Code, OpenAI Codex, GitHub Copilot CLI, and Cursor. Use when the user asks to set up global instructions, personal AGElit-reviewUse this skill for \"literature review workflow\", \"multi-phase lit review\", \"direction paper\", \"review paper protocol\", \"strand-based literature review\", \"citation-grounded review\", \"systemanuscript-formattingUse this skill for \"format manuscript\", \"prepare for submission\", \"journal formatting\", \"LaTeX template\", \"submission checklist\", \"format references\", \"BibTeX\", \"author guidelines\", \"manuscript-writingUse this skill for \"write a paper\", \"draft manuscript\", \"write introduction\", \"write methods section\", \"write results\", \"write discussion\", \"write abstract\", \"structure a paper\", \"acaopenciteUse this skill for "search for papers", "find citations", "look up a DOI", "get BibTeX", "download PDF", "convert PDF to markdown", "find canonical papers", "convert identifiers", "batch download papepaper-reviewUse this skill for \"review this paper\", \"review this manuscript\", \"peer review\", \"review my paper\", \"critique this manuscript\", \"review this submission\", \"give me feedback on my paper\", plot-stylingThis skill should be used when the user asks to "plot data", "make a plot for a paper", "make a publication plot", "create a journal-quality plot", "matplotlib for a figure", "use seaborn", "use plotnpr-review-toolkitReview pull requests and recent code changes across specialized lenses: general code quality, tests, error handling and silent failures, comments and docs, type design, and simplification. Use when thpresentation-builderThis skill should be used when the user asks to "create a presentation", "make slides", "build a slide deck", "create a talk", "make a keynote", "create a Reveal.js presentation", "generate presentatiscientific-figureThis skill should be used when the user asks to "create a figure", "make a scientific figure", "create a paper figure", "make a figure for my paper", "make a figure for my manuscript", "compose figuresecurity-auditThis skill should be used when the user says \"security audit\", \"check for vulnerabilities\", \"security review\", \"harden project\", \"dependency audit\", \"credential scan\", \"check for secrets\svg-figureThis skill should be used when the user asks to "create an SVG figure", "make a schematic", "draw a diagram", "create a schematic diagram", "draw a flowchart", "draw a process flow", "draw a workflow"svg-primitivesUse when the user asks to build a programmatic SVG schematic in Python: flowcharts, boxes and arrows, auto-fit SVG text, mm-precise diagrams, edge-snapped arrows, tangent-correct curve arrowheads, orttransparent-iconsThis skill should be used when the user asks to "make an icon", "generate an icon", "create a scientific icon", "make a transparent icon", "make a minimal icon", "icon for a figure", "icon for a paperupdate-rulesThis skill should be used when the user asks to \"update rules\", \"sync rules\", \"update AGENTS.md\", \"update CLAUDE.md\", \"refresh rules\", \"update project config\", \"sync templates\", \"updateworkflow-referenceThis skill should be used when executing the epic-dev workflow, creating epic branches, managing sprint phases, working with git worktrees for phased feature development, or when the user mentions "ep