panel-interaction-balancing

Name: panel-interaction-balancing
Author: KevinSpringer1

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How to install panel-interaction-balancing?

kevinspringer1/conserved-primer-design/panel-interaction-balancing

$npx -y skills add KevinSpringer1/conserved-primer-design --skill panel-interaction-balancing

Installs into the current project.

Summary

Use when an agent must split tNGS or multiplex primer pairs into pools while minimizing primer-primer interaction risk and reporting pool overflows.

Files · 1

SKILL.md

1	# Panel Interaction Balancing
2
3	Use this after `tngs-panel-design` and before wet-lab export. The helper builds a simple interaction graph from cross-primer complement runs and greedily assigns pools.
4
5	```bash
6	python agentskill/scripts/primer_panel_qc.py assign-pools \
7	--panel-json panel_plan.json \
8	--max-pools 2 \
9	--max-cross-complement-run 8 \
10	--output pooled_panel.json \
11	--csv-output pooled_panel.csv
12	```
13
14	Review:
15
16	- `interaction_edge_count`;
17	- `interactions`;
18	- `overflow_pair_ids`;
19	- whether odd/even tiling pools are preferable for the platform.
20
21	If overflow occurs, redesign or increase pool count before ordering.

6 picks

Type