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qsong-github/drugclaw

57 skills

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SkillInstalls
ade_corpusADE Corpus V2 — Adverse Drug Event relation extraction dataset from annotated PubMed case reports.—adrecsQuery the ADReCS (Adverse Drug Reaction Classification System) v3.3 database.—atcQuery the WHO ATC/DDD Classification System. Use whenever the user asks about ATC codes, drug classification hierarchy, Defined Daily Doses (DDD), or wants to…—bindingdbQuery the BindingDB drug-target binding affinity database. Use whenever the user asks about protein-ligand binding data, affinity measurements (Ki, IC50, Kd,…—cadecQuery the CADEC (CSIRO Adverse Drug Event Corpus). Use whenever the user asks about adverse drug event mentions in consumer health text, entity annotations…—chebiQuery the ChEBI (Chemical Entities of Biological Interest) database.—chemblQuery the ChEMBL database for drug molecules, bioactivity data, and drug targets via the ChEMBL REST API.—cpicClinical Pharmacogenomics Implementation Consortium — gene-based prescribing guidelines Category: Drug-centric | Type: DB | Subcategory: Drug Knowledgebase…—dailymedQuery DailyMed for FDA drug label / package insert information.—ddi_corpusThe DDI Corpus 2013 is the standard benchmark for drug-drug interaction (DDI) extraction from biomedical text.—ddinterQuery the DDInter drug-drug interaction database. Use whenever the user asks about drug-drug interactions, DDI severity levels, or wants to look up…—dgidbQuery the DGIdb (Drug-Gene Interaction Database) for drug-gene interactions, gene druggability categories, and drug target information.—diliDILISkill uses live ChEMBL REST endpoints for hepatotoxicity-related evidence.—dilirankQuery the DILIrank/FDA Liver Toxicity Knowledge Base (LTKB). Use whenever the user asks about drug-induced liver injury (DILI) risk, hepatotoxicity…—drkgQuery the DRKG (Drug Repurposing Knowledge Graph). Use whenever the user asks about drug–gene, drug–disease, gene–disease, or other biomedical entity…—drugbankQuery a locally downloaded DrugBank database. Use whenever the user asks about drug information, drug targets, drug-drug interactions, drug categories, or…—drugcentralQuery the DrugCentral drug pharmacology database. Use whenever the user asks about approved drug structures, drug targets, pharmacological actions, or wants to…—drugcombQuery the DrugComb drug combination database for cancer cell-line synergy and sensitivity data.—drugcombdbQuery canonical DrugCombDB combination records. Use when the user asks about drug pairs, synergy values, or cell-line-specific combination evidence.—drugmechdbQuery the DrugMechDB drug mechanism-of-action database. Use whenever the user asks about drug mechanisms, drug-to-disease paths, biological targets of a drug,…—drugprotQuery drug/chemical and gene/protein entities in the BioCreative VII DrugProt dataset.—drugrepobankQuery the DrugRepoBank drug repurposing evidence database. Use whenever the user asks about repurposing candidates, drug–disease–target repurposing evidence,…—drugs_com_reviewsQuery the DrugLib.com Drug Review Dataset (UCI #461). Use whenever the user asks about patient drug reviews, drug effectiveness ratings, side-effect profiles,…—faersQuery the FDA Adverse Event Reporting System (FAERS) via openFDA API.—fda_orange_bookQuery or inspect the FDA Orange Book - FDA-Approved Drug Products Listing resource for drug-centric tasks with emphasis on drug knowledgebase Use whenever…—gdkdQuery the Gene-Drug Knowledge Database (GDKD) for variant-specific gene–drug associations in oncology.—gdscGDSC contains pharmacological profiles for ~500 drugs tested in ~1,000 cancer cell lines.—iupharQuery the IUPHAR/BPS Guide to Pharmacology REST API for drug targets, ligands (drugs/compounds), and their interactions.—kegg_drugApproved drugs — structures, targets, pathways & drug-drug interactions Category: Drug-centric | Type: DB | Subcategory: DDI API: https://rest.kegg.jp (free,…—livertoxLookup LiverTox drug entries using the canonical packaged fixture file.—mecddiQuery the MecDDI mechanism-based drug-drug interaction database.—medlineplusQuery MedlinePlus for consumer-oriented drug and health-topic information. Accepts drug names, RxCUI codes, NDC codes, or ICD-10-CM diagnosis codes.—molecular_targetsQuery the NCI CCDI Molecular Targets Platform (pediatric oncology) for targets (genes), diseases, drugs, and target-disease associations via its public GraphQL…—molecular_targets_dataQuery the NCI-60 Molecular Target (Protein) database from the Developmental Therapeutics Program.—ndfrtQuery NDF-RT (National Drug File Reference Terminology) via the NCI EVS REST API.—nsidesQuery the nSIDES drug side effect databases (OnSIDES, OffSIDES, KidSIDES).—open_targetsQuery the Open Targets Platform for drug-target-disease associations.—openfdaQuery FDA drug labeling data via openFDA. Use whenever the user asks about drug prescribing information — indications, warnings, dosage, adverse reactions,…—oreganoQuery the OREGANO knowledge graph for computational drug repurposing.—pharmgkbQuery ClinPGx (PharmGKB) and CPIC for pharmacogenomics data. Use whenever the user asks about gene-drug interactions, pharmacogenomics clinical annotations,…—pharmkgQuery the PharmKG knowledge graph (180k entities, 39 relation types, >1M triples).—pheeQuery the PHEE pharmacovigilance event extraction dataset. Use whenever the user asks about annotated adverse drug events, pharmacovigilance case reports,…—psytarQuery the PsyTAR psychiatric adverse-reaction corpus. Use when the user asks about patient-reported ADRs, withdrawal symptoms, drug indications, or…—repodbQuery the RepoDB drug repurposing database. Use whenever the user asks about drug-disease associations, drug repurposing candidates, or wants to look up any…—repurposedrugsQuery the RepurposeDrugs single-agent drug repurposing database.—repurposing_hubQuery the Broad Institute Drug Repurposing Hub (~6,800 compounds). Look up drugs by name, gene target, MOA, disease area, Broad ID, or InChIKey.—rxnormQuery the RxNorm drug naming and normalization API. Use whenever the user asks to look up an RxCUI, normalize a drug name, find drug interactions, retrieve…—sematypDrug-Disease Association Knowledge Graph from literature mining + TTD Category: Drug-centric | Type: KG | Subcategory: Drug-Disease Associations Access: Local…—siderCategory: Drug-centric | Type: DB | Subcategory: Adverse Drug Reaction (ADR) Link: http://sideeffects.embl.de/ | Paper: https://doi.org/10.1093/nar/gkv1075—stitchQuery the STITCH chemical-protein interaction database. Use whenever the user asks about chemical-protein interactions, drug-target binding, compound action…—tac2017Query TAC 2017 ADR annotated drug labels for adverse drug reactions.—tarkgQuery canonical TarKG drug-target triplets. Use when the user asks about drug-target interactions, relation labels, disease/pathway context, or quick lookups…—ttdQuery the Therapeutic Target Database (TTD) for drug-target-disease interaction data.—unid3UniD3 is a multi-knowledge-graph built from 150,000+ PubMed articles, stored as 6 GraphML files.—unitoxQuery the UniTox drug toxicity database. Use whenever the user asks about organ-system toxicity ratings for a drug, multi-organ toxicity profiles, or wants to…—webmdQuery the WebMD Drug Reviews dataset (~362 k patient reviews, 2007–2020).—who_emlQuery the WHO Model List of Essential Medicines (23rd list, 2023).—